STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC186Coiled-coil domain containing 186. (898 aa)    
Predicted Functional Partners:
CASC4
Cancer susceptibility 4.
      
 0.732
ARFIP2
ADP ribosylation factor interacting protein 2.
      
 0.728
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
     
 0.723
VPS54
VPS54 subunit of GARP complex.
     
 0.704
CCDC138
Coiled-coil domain containing 138.
      
 0.700
PRR36
Proline rich 36.
      
 0.698
EIPR1
EARP complex and GARP complex interacting protein 1.
      
 0.669
STX16
Syntaxin 16; Belongs to the syntaxin family.
     
 0.653
VPS53
VPS53 subunit of GARP complex.
     
 0.648
STX6
Syntaxin 6; Belongs to the syntaxin family.
     
 0.642
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.