Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
OGFOD12-oxoglutarate and iron dependent oxygenase domain containing 1. (542 aa)    
Predicted Functional Partners:
RPS23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.861
ENSCSAP00000018451
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
 0.856
PCK1
Phosphoenolpyruvate carboxykinase 1.
     
 0.706
CAPRIN1
Cell cycle associated protein 1.
      
 0.671
FAM9C
Family with sequence similarity 9 member C.
   
 
 0.646
FAM9A
Family with sequence similarity 9 member A.
   
 
 0.646
SYCP3
Cor1 domain-containing protein.
   
 
 0.646
LOC103218164
Cor1 domain-containing protein.
   
 
 0.646
CPOX
Coproporphyrinogen oxidase.
   
  
 0.640
TLR4
Toll like receptor 4; Belongs to the Toll-like receptor family.
      
 0.613
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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