STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC6Transmembrane channel-like protein. (721 aa)    
Predicted Functional Partners:
EFHB
EF-hand domain family member B.
    
 
 0.585
SLC22A23
Solute carrier family 22 member 23.
   
 0.568
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
     
 0.538
RASA1
RAS p21 protein activator 1.
    
 
 0.529
AZIN2
Antizyme inhibitor 2; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.510
ZNF683
Zinc finger protein 683.
    
 0.509
TRPC4
ANK_REP_REGION domain-containing protein.
      
 0.508
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
     
 0.507
SPATS1
Spermatogenesis associated serine rich 1.
      
 0.504
SKIV2L
Ski2 like RNA helicase.
    
 
 0.501
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.