STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUGP2SURP and G-patch domain containing 2. (1084 aa)    
Predicted Functional Partners:
GIN1
Gypsy retrotransposon integrase 1.
      
 0.670
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 0.616
UBXN8
UBX domain protein 8.
      
 0.574
RBM17
RNA binding motif protein 17.
   
 
 0.571
HNRNPC
Heterogeneous nuclear ribonucleoprotein C (C1/C2).
    
 
 0.557
HNRNPCL1
RRM domain-containing protein.
    
 
 0.557
TMEM126B
Transmembrane protein 126B.
    
   0.556
NONO
NOPS domain-containing protein.
    
   0.545
ENSCSAP00000010546
RRM domain-containing protein.
    
   0.545
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 
 0.540
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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