STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SORCS3Sortilin related VPS10 domain containing receptor 3. (956 aa)    
Predicted Functional Partners:
SORT1
Sortilin.
    
 
 0.741
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
      
 0.670
NGF
Nerve growth factor; Belongs to the NGF-beta family.
    
 
 0.635
VPS35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.612
GAK
Cyclin G associated kinase.
   
 
 0.597
SLC39A12
Solute carrier family 39 member 12.
   
  
 0.542
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
 
 0.532
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
    
 
 0.530
ZNF511
Zinc finger protein 511.
      
 0.529
MRPL43
Mitochondrial ribosomal protein L43.
      
 0.528
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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