STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YTHDC1YTH domain containing 1. (728 aa)    
Predicted Functional Partners:
YTHDC2
YTH domain containing 2.
   
0.959
PAPOLG
Poly(A) polymerase gamma.
   
 0.952
RBM26
RNA binding motif protein 26.
   
 
 0.929
ZC3H3
Zinc finger CCCH-type containing 3.
     
 0.920
RBM27
Uncharacterized protein.
   
 
 0.904
WTAP
WT1 associated protein.
   
 
 0.871
ALKBH5
AlkB homolog 5, RNA demethylase.
      
 0.868
METTL14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 
 0.867
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.859
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.851
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.