STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX6Paired box 6. (436 aa)    
Predicted Functional Partners:
FOXJ2
Forkhead box J2.
   
 0.921
NF1
Neurofibromin 1.
   
  
 0.848
TBR1
T-box brain transcription factor 1.
   
 0.786
FOXD3
Forkhead box D3.
   
 0.786
SOX2
SRY-box transcription factor 2.
   
 
 0.770
NES
Nestin; Belongs to the intermediate filament family.
     
 0.766
NEUROD1
Neurogenic differentiation factor.
   
 
 0.766
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.731
GFAP
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
    
 
 0.718
NEUROD2
Neurogenic differentiation factor.
   
 
 0.698
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.