STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL17A1Collagen type XVII alpha 1 chain. (1503 aa)    
Predicted Functional Partners:
CD151
Tetraspanin.
     
 0.792
ENSCSAP00000001172
Uncharacterized protein.
   
 0.791
DST
Dystonin.
   
 0.753
PLEC
Plectin.
   
 0.740
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
   
 0.700
LTC4S
Leukotriene C4 synthase.
   
 0.670
FSCN2
Fascin.
      
 0.662
LAMA3
Laminin subunit alpha 3.
   
 0.615
LAMB3
Laminin subunit beta 3.
   
 0.608
LAMC2
Laminin subunit gamma 2.
   
 0.599
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.