STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL17A1Collagen type XVII alpha 1 chain. (1503 aa)    
Predicted Functional Partners:
DST
Dystonin.
   
 0.892
ENSCSAP00000001172
Uncharacterized protein.
   
 0.891
LAMA3
Laminin subunit alpha 3.
   
 0.741
LAMB3
Laminin subunit beta 3.
   
 0.740
PLEC
Plectin.
   
 0.715
MACF1
Microtubule actin crosslinking factor 1.
   
 0.713
LAMC2
Laminin subunit gamma 2.
   
 0.695
MMP20
Matrix metallopeptidase 20.
   
 0.679
XPR1
Xenotropic and polytropic retrovirus receptor 1.
      
 0.674
FAM83H
Family with sequence similarity 83 member H.
      
 0.664
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.