STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PMELPremelanosome protein. (661 aa)    
Predicted Functional Partners:
UTP18
UTP18 small subunit processome component.
   
 0.940
WDR46
WD repeat domain 46.
   
 0.938
NOP14
NOP14 nucleolar protein.
   
 0.936
UTP4
UTP4 small subunit processome component.
   
  0.931
PDCD11
Programmed cell death 11.
   
 0.929
DCAF13
DDB1 and CUL4 associated factor 13.
   
 0.926
UTP15
UTP15 small subunit processome component.
   
 0.922
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
   
 
 0.919
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 
 0.917
WDR36
WD repeat domain 36.
   
 
 0.914
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.