STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IRX3Iroquois homeobox 3. (416 aa)    
Predicted Functional Partners:
SCUBE2
Signal peptide, CUB domain and EGF like domain containing 2.
    
 
 0.908
ARID4B
AT-rich interaction domain 4B.
    
 
 0.804
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
      
 0.773
GPR84
G protein-coupled receptor 84.
      
 0.766
SALL4
Spalt like transcription factor 4.
      
 0.743
USH1C
USH1 protein network component harmonin.
   
  
 0.736
GASK1B
Golgi associated kinase 1B.
      
 0.736
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
   
  
 0.695
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
    
 
 0.677
SELENOS
Selenoprotein S.
      
 0.670
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.