STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP19Matrix metallopeptidase 19. (429 aa)    
Predicted Functional Partners:
NID1
Nidogen 1.
   
 
 0.789
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.622
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.597
MYO1E
Myosin IE; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  
 0.586
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 0.560
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
    
 0.535
CMAS
Cytidine monophosphate N-acetylneuraminic acid synthetase.
      
 0.532
CCNY
Cyclin Y; Belongs to the cyclin family.
      
 0.489
TNFAIP6
TNF alpha induced protein 6.
   
 0.485
TIMP4
TIMP metallopeptidase inhibitor 4.
    
 0.480
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.