STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SARNPSAP domain containing ribonucleoprotein. (215 aa)    
Predicted Functional Partners:
DDX39A
DExD-box helicase 39A.
   
 0.985
DDX39B
DExD-box helicase 39B.
   
 0.985
THOC7
THO complex 7.
   
 0.976
THOC1
THO complex 1.
    
 0.967
CHTOP
Chromatin target of PRMT1.
   
 0.966
ZC3H11A
Uncharacterized protein.
    
 0.965
THOC2
THO complex 2.
   
 0.954
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.953
THOC3
THO complex 3.
    
 0.942
ALYREF
Aly/REF export factor.
   
 0.940
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.