STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARNPSAP domain containing ribonucleoprotein. (215 aa)    
Predicted Functional Partners:
DDX39B
DExD-box helicase 39B.
   
 0.972
DDX39A
DExD-box helicase 39A.
   
 0.956
ALYREF
Aly/REF export factor.
   
 0.950
THOC1
THO complex 1.
    
 0.940
CHTOP
Chromatin target of PRMT1.
   
 0.938
POLDIP3
DNA polymerase delta interacting protein 3.
   
 0.928
THOC7
THO complex 7.
   
 0.913
THOC3
THO complex 3.
     
 0.896
THOC5
THO complex 5.
    
 0.891
THOC2
THO complex 2.
   
 0.879
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.