STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CYLDCYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. (953 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.997
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.995
IKBKE
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.991
TRAF2
TNF receptor-associated factor.
    
 0.990
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.984
SQSTM1
Sequestosome 1.
    
 0.984
SPATA2
Spermatogenesis associated 2.
     
 0.983
BCL3
BCL3 transcription coactivator.
   
 0.982
TNFRSF1A
TNF receptor superfamily member 1A.
    
 0.979
RNF31
Uncharacterized protein.
    
 0.970
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.