STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYLDCYLD lysine 63 deubiquitinase; Belongs to the peptidase C19 family. (953 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.993
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.989
TNFRSF1A
TNF receptor superfamily member 1A.
    
 0.981
IKBKE
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.974
TRAF2
TNF receptor-associated factor.
    
 0.973
SPATA2
Spermatogenesis associated 2.
     
 0.970
SQSTM1
Sequestosome 1.
    
 0.962
DDX58
DExD/H-box helicase 58.
    
 0.960
BCL3
BCL3 transcription coactivator.
   
 0.954
UBC
Uncharacterized protein.
   
 0.945
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.