STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSBP4Single stranded DNA binding protein 4. (363 aa)    
Predicted Functional Partners:
SSBP2
Single stranded DNA binding protein 2.
   
   0.983
LDB1
LIM domain binding 1.
   
 
 0.944
ENSCSAP00000009499
Uncharacterized protein.
   
   0.933
ENSCSAP00000016711
Uncharacterized protein.
   
   0.933
LMO4
LIM domain only 4.
    
 
 0.913
ISL2
ISL LIM homeobox 2.
    
 
 0.912
ISL1
ISL LIM homeobox 1.
    
 
 0.912
LMX1B
LIM homeobox transcription factor 1 beta.
    
 
 0.911
LHX4
LIM homeobox 4.
    
 
 0.846
LHX6
LIM homeobox 6.
    
   0.825
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.