STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC59Leucine rich repeat containing 59. (307 aa)    
Predicted Functional Partners:
SND1
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
 
 0.858
YBX1
Y-box binding protein 1.
    
 
 0.761
STAU1
Staufen double-stranded RNA binding protein 1.
    
   0.756
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
    
 
 0.573
TMEM33
Transmembrane protein 33.
      
 0.566
UBXN4
UBX domain protein 4.
   
  
 0.563
ILF3
Interleukin enhancer binding factor 3.
    
   0.551
DHX9
DExH-box helicase 9.
    
  0.550
OBSL1
Obscurin like 1.
    
  0.530
ITPKC
Kinase; Belongs to the inositol phosphokinase (IPK) family.
      
 0.528
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.