STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPA1Heterogeneous nuclear ribonucleoprotein A1. (372 aa)    
Predicted Functional Partners:
HNRNPK
Uncharacterized protein.
   
 0.885
PTBP1
Polypyrimidine tract binding protein 1.
   
 0.829
HNRNPU
Heterogeneous nuclear ribonucleoprotein U.
   
 0.794
PCBP1
Poly(rC) binding protein 1.
   
 0.792
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.780
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
  
0.705
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.702
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
0.701
EWSR1
EWS RNA binding protein 1.
   
 0.700
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
   
  0.694
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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