STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC5Homeobox C5. (202 aa)    
Predicted Functional Partners:
HOXC4
Homeobox C4.
   
 
0.850
HOXC6
Homeobox C6.
   
 
0.846
CLSTN3
Calsyntenin 3.
      
 0.612
CSMD2
CUB and Sushi multiple domains 2.
      
 0.612
HOXB6
Homeobox B6.
   
 
0.575
HOXB5
Homeobox B5.
  
  
0.553
HOXA7
Homeobox A7.
   
  
0.548
HOXD4
Homeobox D4.
   
  
0.548
HOXB4
Homeobox B4.
   
  
0.543
HOXB7
Homeobox B7.
   
  
0.543
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.