STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXC5Homeobox C5. (202 aa)    
Predicted Functional Partners:
HOXA6
Homeobox A6.
   
   0.963
HOXB5
Homeobox B5.
   
   0.926
HOXA7
Homeobox A7.
   
 
 0.902
HOXC6
Homeobox C6.
   
 
 0.850
HOXC4
Homeobox C4.
   
 
 0.803
HOXB7
Homeobox B7.
   
   0.735
HOXB6
Homeobox B6.
   
 
 0.727
HOXD4
Homeobox D4.
   
 
 0.678
POLR2G
RNA polymerase II subunit G.
    
  0.591
FOXP1
Fork-head domain-containing protein.
      
 0.566
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.