STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXC13Homeobox C13. (329 aa)    
Predicted Functional Partners:
FOXN1
Forkhead box N1.
    
 
 0.717
MSX2
Msh homeobox 2.
   
  
 0.627
LEF1
Lymphoid enhancer binding factor 1.
    
 
 0.563
PADI3
Peptidyl arginine deiminase 3.
      
 0.531
RNF41
Ring finger protein 41.
      
 0.515
DLX3
Distal-less homeobox 3.
   
 
 0.489
KRT10
Keratin 10; Belongs to the intermediate filament family.
    
 
 0.487
WNT10A
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
     
 0.482
VSIG8
V-set and immunoglobulin domain containing 8.
      
 0.469
TYR
Tyrosinase.
    
 
 0.468
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.