STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COLGALT1Collagen beta(1-O)galactosyltransferase 1. (622 aa)    
Predicted Functional Partners:
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
0.995
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
  
 
 
0.975
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
0.962
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
0.957
COL21A1
Collagen type XXI alpha 1 chain.
    
 0.807
RITA1
RBPJ interacting and tubulin associated 1.
    
   0.708
COL4A2
Collagen type IV alpha 2 chain.
    
 0.621
COL6A2
Collagen type VI alpha 2 chain.
   
 0.594
COL8A2
Collagen type VIII alpha 2 chain.
    
 0.579
COL4A1
Collagen type IV alpha 1 chain.
    
 0.528
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.