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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT79Keratin 79; Belongs to the intermediate filament family. (528 aa)    
Predicted Functional Partners:
KRT10
Keratin 10; Belongs to the intermediate filament family.
   
0.883
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.686
LRIG1
Leucine rich repeats and immunoglobulin like domains 1.
    
 0.654
KRT2
Keratin 2; Belongs to the intermediate filament family.
  
0.602
DSG1
Desmoglein 1; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
  
 0.542
KRT5
Keratin 5; Belongs to the intermediate filament family.
  
0.507
ACTR5
Actin related protein 5; Belongs to the actin family.
    
 0.502
NFRKB
Nuclear factor related to kappaB binding protein.
    
 0.488
KRT9
Keratin 9; Belongs to the intermediate filament family.
   
0.487
LOR
Uncharacterized protein.
   
 0.480
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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