STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT13Synaptotagmin 13. (394 aa)    
Predicted Functional Partners:
ODF1
Outer dense fiber of sperm tails 1.
      
 0.669
SPATA20
Spermatogenesis-associated protein 20; May play a role in fertility regulation.
      
 0.667
CCIN
Calicin.
      
 0.665
SPATA18
Spermatogenesis associated 18.
      
 0.616
PTN
Pleiotrophin.
      
 0.615
ENSCSAP00000006943
V-SNARE coiled-coil homology domain-containing protein.
    
 0.606
TSPAN8
Tetraspanin 8; Belongs to the tetraspanin (TM4SF) family.
     
 0.594
KLF6
Kruppel like factor 6.
    
 
 0.578
SCNN1B
Sodium channel epithelial 1 beta subunit; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.575
RRAD
GTP-binding protein; Belongs to the small GTPase superfamily. RGK family.
      
 0.571
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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