STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PKD2L1Polycystin 2 like 1, transient receptor potential cation channel. (804 aa)    
Predicted Functional Partners:
PKD1
Polycystin 1, transient receptor potential channel interacting.
   
 0.895
PKD1L3
Polycystin 1 like 3, transient receptor potential channel interacting.
    
 
0.877
GPR4
G protein-coupled receptor 4; Belongs to the G-protein coupled receptor 1 family.
     
 0.817
TAS1R2
Taste 1 receptor member 2.
      
 0.698
TRPM5
Transient receptor potential cation channel subfamily M member 5.
      
 0.694
PKD1L2
Uncharacterized protein.
    
 
 0.678
PKDREJ
Polycystin family receptor for egg jelly.
   
 0.664
TAS1R1
Taste 1 receptor member 1.
      
 0.663
PRSS37
Serine protease 37.
      
 0.653
TRPC1
Transient receptor potential cation channel subfamily C member 1; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.643
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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