STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF20Transcription factor 20. (1960 aa)    
Predicted Functional Partners:
LOC103223410
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 0.671
BRD1
Bromodomain containing 1.
   
 
 0.653
SBF1
SET binding factor 1.
   
 
 0.650
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.647
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
   
 0.626
CERT1
Ceramide transporter 1.
      
 0.612
CHKB
Choline kinase beta.
      
 0.601
ZDHHC8
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.562
PRPF40A
Pre-mRNA processing factor 40 homolog A.
    
 0.558
CELSR1
Cadherin EGF LAG seven-pass G-type receptor 1; Belongs to the G-protein coupled receptor 2 family.
      
 0.553
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.