STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMBRA1Autophagy and beclin 1 regulator 1. (1208 aa)    
Predicted Functional Partners:
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.993
BECN2
Beclin 2.
    
 0.991
BECN1
Beclin 1.
    
 0.990
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.979
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
   
 0.978
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
   
 
 0.976
ATG14
Autophagy related 14.
     
 0.972
PINK1
PTEN induced kinase 1.
    
 0.966
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.961
DDA1
DET1 and DDB1 associated 1.
    
 0.960
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.