STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF408Zinc finger protein 408. (719 aa)    
Predicted Functional Partners:
GPATCH3
G-patch domain containing 3.
   
    0.964
CCNJ
Cyclin J; Belongs to the cyclin family.
   
 0.720
ARHGAP31
Rho GTPase activating protein 31.
      
 0.673
TSPAN12
Tetraspanin.
     
 0.671
SAMD11
Uncharacterized protein.
    
 
 0.668
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase.
   
 
 0.638
NDP
Norrin cystine knot growth factor NDP.
    
 
 0.614
KIF11
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.580
FZD4
Frizzled class receptor 4; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.567
DOCK6
DHR-2 domain-containing protein; Belongs to the DOCK family.
      
 0.566
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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