STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf49Chromosome 11 open reading frame 49. (303 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
    
 
 0.576
C12orf10
Chromosome 12 open reading frame 10.
      
 0.568
TPGS2
Tubulin polyglutamylase complex subunit 2.
    
   0.541
TTLL1
Tubulin tyrosine ligase like 1.
    
 
 0.535
NICN1
Uncharacterized protein.
    
   0.517
MFSD5
Major facilitator superfamily domain containing 5.
      
 0.478
PFDN5
Prefoldin subunit 5.
      
 0.472
UQCC3
Ubiquinol-cytochrome c reductase complex assembly factor 3.
      
 0.440
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.