STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM38ATransmembrane protein 38A. (299 aa)    
Predicted Functional Partners:
ANKRD23
Ankyrin repeat domain 23.
   
 
 0.689
RPL3L
Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family.
   
  
 0.680
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
  
 0.647
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
  
 0.644
MIOX
Myo-inositol oxygenase.
      
 0.639
TMEM154
Transmembrane protein 154.
      
 0.631
BSND
Barttin CLCNK type accessory beta subunit.
      
 0.630
SLC12A3
Solute carrier family 12 member 3.
      
 0.621
AQP6
Aquaporin 6; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.620
TMEM161A
Transmembrane protein 161A.
      
 0.572
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.