STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM38ATransmembrane protein 38A. (299 aa)    
Predicted Functional Partners:
DOK2
Docking protein 2.
    
   0.760
KLHL31
Kelch like family member 31.
   
  
 0.644
RHBDD1
Rhomboid domain containing 1.
      
 0.634
PLPP7
Phospholipid phosphatase 7 (inactive).
   
  
 0.599
ANKRD23
Ankyrin repeat domain 23.
   
  
 0.593
TMEM221
Uncharacterized protein.
   
  
 0.587
RPL3L
Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family.
   
  
 0.581
TMEM171
Transmembrane protein 171.
      
 0.548
TMEM223
Transmembrane protein 223.
      
 0.544
ZSCAN16
Zinc finger and SCAN domain containing 16.
      
 0.540
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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