STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMDT1Single-pass membrane protein with aspartate rich tail 1. (107 aa)    
Predicted Functional Partners:
MICU1
Mitochondrial calcium uptake 1.
    
 0.995
MCU
Mitochondrial calcium uniporter.
    
 0.995
MCUB
Mitochondrial calcium uniporter dominant negative beta subunit.
    
 0.991
MICU2
Mitochondrial calcium uptake 2.
    
 0.986
MICU3
Mitochondrial calcium uptake family member 3.
    
 0.972
ATP5F1D
ATP synthase F1 subunit delta.
   
    0.897
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
     
 0.848
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
     
 0.842
EDF1
Endothelial differentiation related factor 1.
   
    0.822
MAIP1
Matrix AAA peptidase interacting protein 1.
     
 0.753
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.