Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GOT1Aspartate aminotransferase. (413 aa)    
Predicted Functional Partners:
MDH2
Malate dehydrogenase 2.
   
 0.987
GOT2
Aspartate aminotransferase.
  
 
0.984
GPT2
Glutamic--pyruvic transaminase 2.
   
 0.977
GLUD1
ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.972
MDH1
Malate dehydrogenase.
   
 0.971
GPT
Glutamic--pyruvic transaminase.
   
 0.966
LDHB
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.963
ASNS
Asparagine synthetase [glutamine-hydrolyzing].
   
 0.963
TAT
Tyrosine aminotransferase; Transaminase involved in tyrosine breakdown. Converts tyrosine to p-hydroxyphenylpyruvate.
   
 0.956
MPST
Sulfurtransferase.
  
 
 0.955
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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