Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRT85Keratin 85; Belongs to the intermediate filament family. (507 aa)    
Predicted Functional Partners:
KRT34
Keratin 34; Belongs to the intermediate filament family.
  
0.864
KRTAP11-1
Keratin associated protein 11-1.
   
  
 0.750
KRT82
Keratin 82; Belongs to the intermediate filament family.
   
  0.695
KRT37
Keratin 37; Belongs to the intermediate filament family.
   
  0.639
KRT27
Keratin 27; Belongs to the intermediate filament family.
   
 0.628
KRT35
Keratin 35; Belongs to the intermediate filament family.
   
 0.618
RFX8
RFX family member 8, lacking RFX DNA binding domain.
      
 0.576
KRT33A
Keratin 33A; Belongs to the intermediate filament family.
   
 0.572
KRT83
Keratin 83; Belongs to the intermediate filament family.
   
  0.552
KRT81
Keratin 81; Belongs to the intermediate filament family.
   
  0.552
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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