STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A13Solute carrier family 39 member 13. (400 aa)    
Predicted Functional Partners:
DDX52
DExD-box helicase 52.
      
 0.844
ECM1
Extracellular matrix protein 1.
      
 0.844
SLC15A2
Solute carrier family 15 member 2.
    
 
 0.823
ITGAM
Integrin subunit alpha M; Belongs to the integrin alpha chain family.
   
  
 0.778
OAS2
2'-5'-oligoadenylate synthetase 2.
      
 0.709
ZSWIM8
Zinc finger SWIM-type containing 8.
      
 0.700
TAF9B
TATA-box binding protein associated factor 9b.
      
 0.700
CLEC17A
C-type lectin domain containing 17A.
      
 0.698
CEACAM1
Uncharacterized protein.
   
 0.670
MRPS14
Mitochondrial ribosomal protein S14.
      
 0.669
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.