STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CELF1CUGBP Elav-like family member 1. (513 aa)    
Predicted Functional Partners:
RALY
RALY heterogeneous nuclear ribonucleoprotein.
    
 
 0.937
MBNL1
Muscleblind like splicing regulator 1.
   
 
 0.884
HNRNPC
Heterogeneous nuclear ribonucleoprotein C (C1/C2).
   
 
 0.862
HNRNPCL1
RRM domain-containing protein.
   
 
 0.828
SSX2IP
SSX family member 2 interacting protein.
   
 
 0.794
MBNL3
Muscleblind like splicing regulator 3.
   
 
 0.778
NOTCH1
Notch receptor 1.
    
   0.757
CLCN1
Chloride channel protein.
      
 0.729
RALYL
RALY RNA binding protein like.
    
 
 0.672
PTBP3
Polypyrimidine tract binding protein 3.
   
 
 0.646
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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