STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM180BFamily with sequence similarity 180 member B. (224 aa)    
Predicted Functional Partners:
AGBL2
ATP/GTP binding protein like 2.
      
 0.612
RAPSN
Receptor associated protein of the synapse.
      
 0.610
PTPMT1
Protein tyrosine phosphatase mitochondrial 1.
      
 0.576
SLC39A13
Solute carrier family 39 member 13.
      
 0.574
CADM2
Cell adhesion molecule 2.
      
 0.574
ADGRG4
Adhesion G protein-coupled receptor G4; Belongs to the G-protein coupled receptor 2 family.
      
 0.549
PSMC3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
      
 0.486
MYBPC3
Myosin binding protein C, cardiac.
      
 0.484
ZBED2
Zinc finger BED-type containing 2.
  
     0.461
DCAF16
DDB1 and CUL4 associated factor 16.
  
     0.433
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.