STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FNBP4Formin binding protein 4. (1015 aa)    
Predicted Functional Partners:
DDX17
DEAD-box helicase 17; Belongs to the DEAD box helicase family.
   
 0.780
PNISR
PNN interacting serine and arginine rich protein.
   
    0.738
LARGE2
LARGE xylosyl- and glucuronyltransferase 2.
      
 0.698
SRSF11
Serine and arginine rich splicing factor 11.
   
    0.668
LENG8
Leukocyte receptor cluster member 8.
   
  
 0.625
TCERG1
Transcription elongation regulator 1.
   
  
 0.620
FCHSD1
FCH and double SH3 domains 1.
    
 
 0.620
PPP2CA
Serine/threonine-protein phosphatase.
   
 0.613
PPP2CB
Serine/threonine-protein phosphatase.
   
 0.613
ZC3H18
Zinc finger CCCH-type containing 18.
   
   0.611
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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