STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLIT1Slit guidance ligand 1. (1396 aa)    
Predicted Functional Partners:
ROBO2
Roundabout guidance receptor 2.
   
 0.998
ROBO1
Uncharacterized protein.
   
 0.998
ENSCSAP00000012589
LRRNT domain-containing protein.
 
   
 
0.910
ROBO4
Roundabout guidance receptor 4.
   
 0.904
ROBO3
Roundabout guidance receptor 3.
    
 0.861
ENSCSAP00000002167
Ig-like domain-containing protein.
   
 0.843
ENSCSAP00000002207
Ig-like domain-containing protein.
   
 0.729
SEMA6D
Semaphorin 6D; Belongs to the semaphorin family.
      
 0.690
ENSCSAP00000002265
Uncharacterized protein.
   
 0.674
SEMA4F
Ssemaphorin 4F; Belongs to the semaphorin family.
      
 0.632
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.