STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LETMD1LETM1 domain containing 1. (360 aa)    
Predicted Functional Partners:
VWCE
Von Willebrand factor C and EGF domains.
      
 0.577
RNF185
Ring finger protein 185.
    
   0.554
TMEM43
Transmembrane protein 43.
    
   0.512
CSAD
Cysteine sulfinic acid decarboxylase.
      
 0.488
PDXK
Pyridoxal kinase.
      
 0.486
CSDC2
Cold shock domain containing C2.
      
 0.476
CIP2A
Cell proliferation regulating inhibitor of protein phosphatase 2A.
      
 0.461
PJA2
Praja ring finger ubiquitin ligase 2.
    
 
 0.445
DLK1
Delta like non-canonical Notch ligand 1.
    
   0.431
LMBR1
Limb development membrane protein 1; Belongs to the LIMR family.
    
 
 0.427
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.