STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC55Leucine rich repeat containing 55. (311 aa)    
Predicted Functional Partners:
RGS20
Regulator of G protein signaling 20.
      
 0.605
KCNMB1
Potassium calcium-activated channel subfamily M regulatory beta subunit 1.
     
 0.581
LRRC43
Leucine rich repeat containing 43.
    
 0.511
TMC8
Transmembrane channel-like protein.
    
 0.491
GLO1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
      
 0.490
LOC103247421
Uncharacterized protein.
    
 0.487
LOC103247423
Uncharacterized protein.
    
 0.487
HDHD5
Haloacid dehalogenase like hydrolase domain containing 5.
      
 0.483
INPP5J
Inositol polyphosphate-5-phosphatase J.
      
 0.480
LRRD1
Leucine rich repeats and death domain containing 1.
      
 0.478
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.