STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPC1Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (558 aa)    
Predicted Functional Partners:
SDC1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.981
SDC4
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
   
 
 0.959
FGF2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 0.937
HBEGF
Heparin binding EGF like growth factor.
    
 0.922
SDC2
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
 0.910
SLIT2
Slit guidance ligand 2.
    
 0.718
ENSCSAP00000012589
LRRNT domain-containing protein.
    
 0.706
GPC3
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
   
 0.687
NOTUM
Notum, palmitoleoyl-protein carboxylesterase.
    
 0.678
PLAC1
Placenta enriched 1.
      
 0.670
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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