STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHX1LIM homeobox 1. (406 aa)    
Predicted Functional Partners:
SSBP4
Single stranded DNA binding protein 4.
    
 
 0.788
ENSCSAP00000009499
Uncharacterized protein.
    
 
 0.720
ENSCSAP00000016711
Uncharacterized protein.
    
 
 0.720
CCNK
Cyclin K; Belongs to the cyclin family.
    
   0.697
SLC13A3
Solute carrier family 13 member 3.
      
 0.673
LDB1
LIM domain binding 1.
    
 0.671
FOXC2
Forkhead box C2.
   
 0.667
ENSCSAP00000012541
Uncharacterized protein.
    
 0.630
PAX2
Paired box 2.
   
 0.614
PAX8
Paired box 8.
   
 0.598
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.