STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBX6T-box transcription factor 6. (436 aa)    
Predicted Functional Partners:
MESP2
Uncharacterized protein.
    
 0.839
RIPPLY2
Ripply transcriptional repressor 2.
     
 0.800
MSGN1
Mesogenin 1.
   
 0.772
HES7
Hes family bHLH transcription factor 7.
    
 0.753
FOXA2
Forkhead box A2.
    
 0.729
SOX1
SRY-box transcription factor 1.
   
 0.686
SOX17
SRY-box transcription factor 17.
    
 0.634
HOXB1
Homeobox B1.
   
 
 0.601
CDX2
Caudal type homeobox 2.
   
 
 0.595
WNT3A
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
   
 0.568
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.