STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGAP1ArfGAP with GTPase domain, ankyrin repeat and PH domain 1. (782 aa)    
Predicted Functional Partners:
TANC1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1.
    
 
 0.856
ARHGAP24
Rho GTPase activating protein 24.
    
 
 0.687
PCDH10
Protocadherin 10.
    
 
 0.675
USP46
Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.
      
 0.673
PNKD
PNKD metallo-beta-lactamase domain containing.
      
 0.673
CHM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
      
 0.673
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
      
 0.671
NEO1
Neogenin 1.
   
 
 0.664
ENSCSAP00000002968
Uncharacterized protein.
   
   0.658
UNC5B
Unc-5 netrin receptor B.
    
 0.606
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.