STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APOBRApolipoprotein B receptor. (1138 aa)    
Predicted Functional Partners:
APOB
Apolipoprotein B.
     
 0.688
APOC4
Apolipoprotein C-IV; May participate in lipoprotein metabolism; Belongs to the apolipoprotein C4 family.
     
 0.650
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
      
 0.572
TUFM
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
      
 0.565
MYLIP
Myosin regulatory light chain interacting protein.
      
 0.521
PLBD1
Phospholipase B-like; Putative phospholipase.
   
  
 0.495
ANKRD42
Ankyrin repeat domain 42.
      
 0.486
SGF29
SAGA complex associated factor 29.
      
 0.484
NUPR1
Nuclear protein 1, transcriptional regulator.
      
 0.476
DUOXA2
Dual oxidase maturation factor 2.
      
 0.465
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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