STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HHLA2HERV-H LTR-associating 2. (417 aa)    
Predicted Functional Partners:
FAM83B
Family with sequence similarity 83 member B.
      
 0.743
FBXL20
F-box and leucine rich repeat protein 20.
      
 0.739
CCDC6
Coiled-coil domain containing 6.
    
 
 0.721
PHKA2
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.
      
 0.716
TMEFF2
Transmembrane protein with EGF like and two follistatin like domains 2.
      
 0.698
YPEL4
Protein yippee-like; Belongs to the yippee family.
   
 
 0.565
TNFSF9
TNF superfamily member 9; Belongs to the tumor necrosis factor family.
  
   
 0.562
TMIGD2
Transmembrane and immunoglobulin domain containing 2.
    
 
 0.540
TIGD1
Tigger transposable element derived 1.
    
 
 0.472
ICOSLG
Uncharacterized protein.
      
 0.465
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.