STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APOBEC3FApolipoprotein B mRNA editing enzyme catalytic subunit 3F. (370 aa)    
Predicted Functional Partners:
SERINC4
Serine incorporator 4.
      
 0.946
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.863
ELOC
Elongin C; Belongs to the SKP1 family.
    
 0.815
ELOB
Ubiquitin-like domain-containing protein.
   
 0.780
ENSCSAP00000018734
Ubiquitin-like domain-containing protein.
   
 0.780
APOBEC4
Apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4.
     
 0.751
RNF7
Ring finger protein 7.
   
 0.743
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.742
TRIM5
Uncharacterized protein.
   
  
 0.711
CBFB
Core-binding factor subunit beta.
    
 
 0.701
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.