STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PODNL1Podocan like 1. (511 aa)    
Predicted Functional Partners:
LRR1
Leucine rich repeat protein 1.
  
   
 0.690
LRRC10B
Leucine rich repeat containing 10B.
  
 
  0.502
NYX
Nyctalopin.
    
 0.490
RAE1
Ribonucleic acid export 1.
    
 
 0.483
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
      
 0.480
ENSCSAP00000000892
VWFD domain-containing protein.
    
 0.477
ZAN
Zonadhesin (gene/pseudogene).
    
 0.477
RAI2
Retinoic acid induced 2.
    
 0.471
WHRN
Whirlin.
    
 
 0.464
LRRC8E
Leucine rich repeat containing 8 VRAC subunit E.
  
     0.457
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.