STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KDM8Lysine demethylase 8. (416 aa)    
Predicted Functional Partners:
RCCD1
RCC1 domain containing 1.
    
 0.965
RPS6
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.880
ENSCSAP00000018747
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.880
CCDC130
Coiled-coil domain containing 130.
    
   0.784
RABEP2
Rabaptin, RAB GTPase binding effector protein 2.
      
 0.644
JMJD4
Jumonji domain containing 4.
      
 0.482
RIOX2
Bifunctional lysine-specific demethylase and histidyl-hydroxylase; Oxygenase that can act as both a histone lysine demethylase and a ribosomal histidine hydroxylase.
      
 0.478
MTA3
Metastasis associated 1 family member 3.
      
 0.473
BLM
BLM RecQ like helicase.
      
 0.472
HSD17B8
Hydroxysteroid 17-beta dehydrogenase 8.
      
 0.454
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.