Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VAMP7Vesicle associated membrane protein 7; Belongs to the synaptobrevin family. (220 aa)    
Predicted Functional Partners:
SNAP23
Synaptosome associated protein 23.
   
 0.992
STX7
Syntaxin 7; Belongs to the syntaxin family.
   
 0.990
STX4
Syntaxin 4; Belongs to the syntaxin family.
    
 0.987
STX3
Syntaxin 3; Belongs to the syntaxin family.
    
 0.977
SNAP29
Synaptosome associated protein 29.
   
 0.969
STX17
Syntaxin 17; Belongs to the syntaxin family.
   
 0.966
STX8
Syntaxin 8.
   
 0.965
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.954
NAPA
NSF attachment protein alpha.
    
 0.950
STX18
Syntaxin 18.
    
 0.946
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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