Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAD23ARAD23 homolog A, nucleotide excision repair protein. (363 aa)    
Predicted Functional Partners:
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
  
0.994
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.968
ENSCSAP00000007525
Josephin domain-containing protein.
    
 0.963
ATXN3L
Ataxin 3 like.
    
 0.963
NGLY1
N-glycanase 1.
    
 0.958
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
   
 0.943
PSMC1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.925
GTF2H5
General transcription factor IIH subunit 5.
   
 0.911
XPA
XPA, DNA damage recognition and repair factor.
    
 0.884
VCP
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.850
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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