STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TUT1PAP-associated domain-containing protein. (784 aa)    
Predicted Functional Partners:
CPSF3
Cleavage and polyadenylation specific factor 3.
    
 0.921
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
   
 
 0.919
PRPF31
Pre-mRNA processing factor 31.
    
 
 0.911
PRPF4
Pre-mRNA processing factor 4.
    
   0.909
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
   0.909
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.902
CCDC84
Coiled-coil domain containing 84.
    
   0.873
PAPOLG
Poly(A) polymerase gamma.
   
 
 0.870
PAPOLA
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.858
SYMPK
Symplekin.
   
 0.843
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.