STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC9C1Solute carrier family 9 member C1. (1185 aa)    
Predicted Functional Partners:
SORL1
Sortilin related receptor 1.
   
 
 0.742
SH3RF3
SH3 domain containing ring finger 3.
   
  
 0.736
SORBS2
Sorbin and SH3 domain containing 2.
   
  
 0.697
NPHP1
Nephrocystin 1.
      
 0.684
SLC9A1
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.674
CSN1S1
Casein alpha s1.
      
 0.673
ABCA7
ATP binding cassette subfamily A member 7.
   
  
 0.569
SLC7A13
Solute carrier family 7 member 13.
    
 
 0.490
SLC9A9
Solute carrier family 9 member A9.
      
 0.485
LGALS1
Galectin.
    
 
 0.469
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.